The detailed information of tRNA gene sequence


Sequence ID>A173000343
Genome IDCP021324
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosomarinus catalina SPOT01 [CP021324]
Start position on genome 852179
End posion on genome 852103
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtatttcgct
tRNA gene sequence 
GGGATCGTGGTCTAGCTTGGTATGATTCTGCGTTTGGGACGCAGAGGTCGCGAATTCAAA
TTTCGCCGATCCCACCA
Downstream region at tRNA end position 
taatcattat
Secondary structure (Cloverleaf model)
>A173000343	Pro	TGG
                   t      ACCA taatcattat
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     C G C T T     A
      C G A        G      | | | | |     A
    T       T C T G       G C G A A     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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