The detailed information of tRNA gene sequence


Sequence ID>A179000001
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 2006417
End posion on genome 2006508
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tacgcaaaaa
tRNA gene sequence 
CCCGCCTTAGCTCAGCCTGGTTAGAGCGGTCGGCTGTAGACCGACAGGTCCCCGATTCGA
ATTCGGGAGGCGGGAcat
Downstream region at tRNA end position 
ttcccctttg
Secondary structure (Cloverleaf model)
>A179000001	Tyr	GTA
                   a      Acat ttcccctttg
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G C T     A
    C C G A        A      | | | | |     G
  T         C T C G       C C C G A     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G - C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=17 (in A-loop)
ACCTTACGACTGCGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK