The detailed information of tRNA gene sequence


Sequence ID>A179000010
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 1237267
End posion on genome 1237384
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttagtgaag
tRNA gene sequence 
CGGCCCGTAGCTCAGCGGCAGAGCACCCGGCTGTAGACCGGGGGGTCCCGGGTTCAAATC
CCGGCGGGCCGACCA
Downstream region at tRNA end position 
gcagtattct
Secondary structure (Cloverleaf model)
>A179000010	Tyr	GTA
                   g      ACCA gcagtattct
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     GGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=43 (in A-loop)
TCAGCCCCACGGGGGACAATTCACTAAATCCCCGTGGCCGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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