The detailed information of tRNA gene sequence


Sequence ID>A179000024
Genome IDCP000968
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Korarchaeum cryptofilum OPF8 [CP000968]
Start position on genome 1164678
End posion on genome 1164793
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttatggatgg
tRNA gene sequence 
CGGGGCGTAGCTCAGCCTGGTAGAGCGGCCGGCTGTAGACCGGCAGGCCGGGGGTTCGAG
TCCCCCCGCCCCGAttt
Downstream region at tRNA end position 
aatctatcct
Secondary structure (Cloverleaf model)
>A179000024	Tyr	GTA
                   g      Attt aatctatcct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=42 (in A-loop)
TGGGCGTCTATTGACGCTCCGTCAGCGGCAGCTCCCACAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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