The detailed information of tRNA gene sequence


Sequence ID>A179000026
Genome IDCP000968
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Korarchaeum cryptofilum OPF8 [CP000968]
Start position on genome 1431030
End posion on genome 1430924
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ggccctatgt
tRNA gene sequence 
GGGCCCGTGGCTCAGACTGGATAGAGCGCCTGCCTTATAAGCGGGAGGTCGGGGGTTCAA
GTCCCCCCGGGCCCAttc
Downstream region at tRNA end position 
agttttatct
Secondary structure (Cloverleaf model)
>A179000026	Ile	TAT
                   t      Attc agttttatct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C C C C     A
    C A G A        G      | | | | |     A
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    C - G
                    C - G
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A *
                    T A T
intron: position=38, length=32 (in A-loop)
TGGCGGCTCCCGCTACAGAGCGCCAGGGGAAA
Intron
Comment/Decision
Genome/Seq. Info.-

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