The detailed information of tRNA gene sequence


Sequence ID>A179000027
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 506083
End posion on genome 506199
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aagaaaccga
tRNA gene sequence 
CGGCCCGTAGCTCAGCGGTCGAGAGCGCCCGGCTGTAGAACGGGCGGTCCCGGGTTCGAA
TCCCGGCGGGCCGAtag
Downstream region at tRNA end position 
tcctttaccc
Secondary structure (Cloverleaf model)
>A179000027	Tyr	GTA
                   a      Atag tcctttaccc
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C G G G     C
    G       | | | |                 T T
    T       G A G C
      C G A        G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G   A
                  C       A
                  T       G *
                    G T A
intron: position=38, length=43 (in A-loop)
ACAGCCCCTGGGGGGACACCCACACAAAACCCCCCAGGCCTAT
Intron
Comment/Decision
Genome/Seq. Info.-

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