The detailed information of tRNA gene sequence


Sequence ID>A179000032
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 1495532
End posion on genome 1495623
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttctaccca
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGTGGAGCGCCTCACTGGTAGTGAGGAGGTCCCGGGTTCGAA
TCCCGGCCGGGGCTctg
Downstream region at tRNA end position 
gcttcccatt
Secondary structure (Cloverleaf model)
>A179000032	Thr	GGT
                   a      Tctg gcttcccatt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       G
                  T       A *
                    G G T
intron: position=38, length=18 (in A-loop)
ATGGCGGTCAGCCGCCTA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK