The detailed information of tRNA gene sequence


Sequence ID>A179000049
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 55988
End posion on genome 55900
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ttcttgaggg
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATGCGGGGCTTTGGACCCCGTGACCGGGGTTCGAAT
CCCCGCCCGGCTAcct
Downstream region at tRNA end position 
tttattactc
Secondary structure (Cloverleaf model)
>A179000049	Gln	TTG
                   g      Acct tttattactc
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    T T G
intron: position=38, length=16 (in A-loop)
TCCCACACGGGAGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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