The detailed information of tRNA gene sequence


Sequence ID>A179000149
Genome IDCP001994
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanohalophilus mahii DSM 5219 [CP001994]
Start position on genome 1624867
End posion on genome 1624756
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgagtaatgt
tRNA gene sequence 
CCCGCCTTAACTCAGTTGGTAGAGTGCGCGGCTGTAGACCGCGATGCCCCCGGTTCGAGT
CTGGGAGGCGGGACCA
Downstream region at tRNA end position 
aacacctctt
Secondary structure (Cloverleaf model)
>A179000149	Tyr	GTA
                   t      ACCA aacacctctt
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | + |     G
    T       C T C A       C C C G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     ATGCC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=36 (in A-loop)
TATGGTTTGTGTGGATTATCCACATACCGCGCGGTT
Intron
Comment/Decision
Genome/Seq. Info.-

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