The detailed information of tRNA gene sequence


Sequence ID>A179000155
Genome IDCP002051
Search identical group
Phylum/ClassThermoproteota
SpeciesStaphylothermus hellenicus DSM 12710 [CP002051]
Start position on genome 1494986
End posion on genome 1495087
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atatagagta
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGTAGAGCGCCGGCCTCGTAAGCCGGTGGTCGCGGGTTCAAA
TCCCGCCGGCGGCTctt
Downstream region at tRNA end position 
agttaaacct
Secondary structure (Cloverleaf model)
>A179000155	Thr	CGT
                   a      Tctt agttaaacct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=28 (in A-loop)
TCGGTTACCTAATCACCGGAGTCGGGGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK