The detailed information of tRNA gene sequence


Sequence ID>A179000181
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1996014
End posion on genome 1995914
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattaaaaat
tRNA gene sequence 
GCCCCGGTGGCCGAGCGGCTAAGGCGTTGGGCTGCAGACCCAATCTTCCCGGGTTCGAAT
CCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
ttaaaatcat
Secondary structure (Cloverleaf model)
>A179000181	Cys	GCA
                   t      TCCA ttaaaatcat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    C       A G G C
      T A          G     TCTTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    G C A
intron: position=38, length=25 (in A-loop)
CGTTCGGTTTATCACGAATGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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