The detailed information of tRNA gene sequence


Sequence ID>A179000205
Genome IDCP002372
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus MP [CP002372]
Start position on genome 1615156
End posion on genome 1615017
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tattgaacat
tRNA gene sequence 
GGGGGCGTGGTGTAGCCTGGTCCATCATCGCGGGCTCCAGACCCGCGGACCGGGGTTCAA
ATCCCCGCGCCCCCACCA
Downstream region at tRNA end position 
taattttaac
Secondary structure (Cloverleaf model)
>A179000205	Trp	CCA
                   t      ACCA taattttaac
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        G      | | | | |     A
  T         T G T G       C G G G G     C
  G           | | +                 T T
  G         T C A T
    T C C A        C     GGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    C C A
intron: position=38, length=62 (in A-loop)
AGGTGTGAAGACAGGCGGGTTTGCTGATTGGGGATGAGCCTTTGGAGCTCTGACCCGGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK