The detailed information of tRNA gene sequence


Sequence ID>A179000211
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 584159
End posion on genome 584066
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cagtaaaaaa
tRNA gene sequence 
GCGGTCATCGTCTAGTTTGGTCTAGGACACTGGCCTTCCAAGCCCGTAACCCGGGTTCAA
ATCCCGGTGACCGCAttt
Downstream region at tRNA end position 
tataattttg
Secondary structure (Cloverleaf model)
>A179000211	Gly	TCC
                   a      Attt tataattttg
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     G G C C C     A
    T T G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     TAAC
                    C - G
                    T   C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=19 (in A-loop)
TGCACTTTCATGCGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK