The detailed information of tRNA gene sequence


Sequence ID>A179000229
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 1629013
End posion on genome 1628922
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
actctccgtc
tRNA gene sequence 
GGGCCCGTAGTCTAGCGGTTAGGATGCCCGCCTCACGCGCGGGAGATCCCGGGTTCAAAT
CCCGGCGGGCCCACCA
Downstream region at tRNA end position 
attacgttct
Secondary structure (Cloverleaf model)
>A179000229	Val	CAC
                   c      ACCA attacgttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       G *
                    C A C
intron: position=38, length=16 (in A-loop)
AGGAAATCCCTGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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