The detailed information of tRNA gene sequence


Sequence ID>A179000238
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 924583
End posion on genome 924680
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
agatgggcgg
tRNA gene sequence 
GCGTCGATGGTCTAGTGGTTATGACTTGGGCCTTCCAAGCCTACAACCCGGGTTCGAATC
CCGGTCGACGCAtta
Downstream region at tRNA end position 
tttggcctca
Secondary structure (Cloverleaf model)
>A179000238	Gly	TCC
                   g      Atta tttggcctca
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T C T G       C C G G G     C
    G         | | |                 T T
    T       T G A C
      T A          T     CAAC
                    T - A
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=26 (in A-loop)
GGCAGATCAATAGAATCTGCGAAGCA
Intron
Comment/Decision
Genome/Seq. Info.-

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