The detailed information of tRNA gene sequence


Sequence ID>A179000242
Genome IDCP002588
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus veneficus SNP6 [CP002588]
Start position on genome 300625
End posion on genome 300726
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttcagcaaat
tRNA gene sequence 
CCCGCCTTAGCTCAGCTGGCAGAGCGCGGGCCTGTAGAGCCCGTGGTCCCCGGTTCAAAT
CCGGGAGGCGGGActt
Downstream region at tRNA end position 
aactttccta
Secondary structure (Cloverleaf model)
>A179000242	Tyr	GTA
                   t      Actt aactttccta
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G T A
intron: position=38, length=29 (in A-loop)
TTTGCCTTGCTCCCTGCAAGGGGGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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