The detailed information of tRNA gene sequence


Sequence ID>A179000261
Genome IDCP002656
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera cuprina Ar-4 [CP002656]
Start position on genome 1760961
End posion on genome 1761047
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
atcatttact
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGGAGAGCACCCGGCTGAAGACCGGGTTGTCCGGGGTTCAAG
TCCCCGCGGCGGCAtaa
Downstream region at tRNA end position 
gttatatatc
Secondary structure (Cloverleaf model)
>A179000261	Phe	GAA
                   t      Ataa gttatatatc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        A     TTGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G A A
intron: position=38, length=13 (in A-loop)
ACTTAGTTTAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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