The detailed information of tRNA gene sequence


Sequence ID>A179000307
Genome IDCP003098
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum ferrireducens 1860 [CP003098]
Start position on genome 446965
End posion on genome 447061
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atatgtaaag
tRNA gene sequence 
GGGCCCGTAGCTCAGCCCGGTTAGAGCGGCGGGCTTTTAACCCGTAGGTCGTGGGTTCGA
ATCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
gtatttccgt
Secondary structure (Cloverleaf model)
>A179000307	Lys	TTT
                   g      GCCA gtatttccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  C         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=19 (in A-loop)
AAGGGCTACGGCCCGGGTA
Intron
Comment/Decision
Genome/Seq. Info.-

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