The detailed information of tRNA gene sequence


Sequence ID>A179000338
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 348903
End posion on genome 349008
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcttaaac
tRNA gene sequence 
GCCGGGGTGGCTCAGCCTGGTGGAGCGTCGGACTCATAATCCGAAGGTCCCGGGTTCAAA
CCCCGGCCCCGGCActc
Downstream region at tRNA end position 
agagcatgta
Secondary structure (Cloverleaf model)
>A179000338	Met	CAT
                   c      Actc agagcatgta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=32 (in A-loop)
GGGTATTTAATCTCCACCTCCAAGCCTGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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