The detailed information of tRNA gene sequence


Sequence ID>A179000339
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 769091
End posion on genome 769209
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tcccatttga
tRNA gene sequence 
CCCGGCTTAGCTCAGTCTGGCTAGAGCGGCGGACTGTAGATCCGCAGGTCCCCGGTTCGA
ATCCGGGAGCCGGGActt
Downstream region at tRNA end position 
atatttgggc
Secondary structure (Cloverleaf model)
>A179000339	Tyr	GTA
                   a      Actt atatttgggc
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     G G G C C     A
    C T G A        A      | | | | |     G
  T         C T C G       C C C G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=44 (in A-loop)
TTGGGATGCATCCGAGGGCGGATGCAAAACGCCGCTCAGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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