The detailed information of tRNA gene sequence


Sequence ID>A179000367
Genome IDCP003377
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNatronobacterium gregoryi SP2 [CP003377]
Start position on genome 1537556
End posion on genome 1537453
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atacggcctt
tRNA gene sequence 
GGGCACGTAGCTCAGTCCGGAAAGAGCGTCGGACTTCTAATCCGACGGTCGTGGGTTCAA
ATCCCATCGTGCCCGctt
Downstream region at tRNA end position 
gctatcgcgc
Secondary structure (Cloverleaf model)
>A179000367	Arg	TCT
                   t      Gctt gctatcgcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C T G A        A      + | | | |     A
  C         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A A A          G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T C T
intron: position=38, length=29 (in A-loop)
TCCCCGCCGGGATTGCGGTGGGGGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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