The detailed information of tRNA gene sequence


Sequence ID>A179000371
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 499812
End posion on genome 499909
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ataattttga
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCCAGGATGCGGGGCCTTGGCCCCCGTGACCGGGGTTCGAAT
CCCCGCCCGGCTACCA
Downstream region at tRNA end position 
attctataca
Secondary structure (Cloverleaf model)
>A179000371	Gln	TTG
                   a      ACCA attctataca
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C C A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  C       G *
                    T T G
intron: position=38, length=22 (in A-loop)
ATGGCAAAGGTAGCCAAAGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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