The detailed information of tRNA gene sequence


Sequence ID>A179000384
Genome IDCP003423
Search identical group
Phylum/ClassThermoproteota
SpeciesFervidicoccus fontis Kam940 [CP003423]
Start position on genome 864628
End posion on genome 864529
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttgcatgact
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCCGGTAGAGCACCGGCCTCGTAAGCCGGGGGTCGCGGGTTCGA
GTCCCGCCGGCGGCTtct
Downstream region at tRNA end position 
gttttatttt
Secondary structure (Cloverleaf model)
>A179000384	Thr	CGT
                   t      Ttct gttttatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     C G C C C     A
    C C G A        A      | | | | |     G
  C         C T C G       G C G G G     C
  C         | | | |                 T T
  G         G A G C
    G T A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=25 (in A-loop)
CGGTTTAAATTAAAAAATCAGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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