The detailed information of tRNA gene sequence


Sequence ID>A179000431
Genome IDCP006577
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus fulgidus DSM 8774 [CP006577]
Start position on genome 212148
End posion on genome 212039
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agagccacaa
tRNA gene sequence 
GCCCGGGTGGTGTAGTCCGGCCTATCATGCGGGCCTGTCGAGCCCGCGACTCGGGTTCAA
ATCCCGGCCCGGGCGctc
Downstream region at tRNA end position 
tcatcgctta
Secondary structure (Cloverleaf model)
>A179000431	Asp	GTC
                   a      Gctc tcatcgctta
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      + | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G T C
intron: position=38, length=35 (in A-loop)
TGGAGATGGGGTCCTTAAGCCCTAAATCCGCGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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