The detailed information of tRNA gene sequence


Sequence ID>A179000441
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 493753
End posion on genome 493646
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agatatcttg
tRNA gene sequence 
GCGGGGGTGCCCGAGCTAGGACAAAGGGGGCGGCCTGGAAATCCGCTGGCGTAGGCCTGC
CCGGGTTCGAATCCCGGCCCCCGCACCA
Downstream region at tRNA end position 
cttttttcaa
Secondary structure (Cloverleaf model)
>A179000441	Ser	GGA
                   g      ACCA cttttttcaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     G
  A         G C C C       C C G G G     C
  G           | | |                 T T
  G         A G G G
    A C A A        G     TGGCGTAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    C   T
                  C       A
                  T       A *
                    G G A
intron: position=38, length=20 (in A-loop)
AACACAGGCCCACACTTAAG
Intron
Comment/Decision
Genome/Seq. Info.-

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