The detailed information of tRNA gene sequence


Sequence ID>A179000443
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 417179
End posion on genome 417087
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gtttctggtg
tRNA gene sequence 
GGGCCGGTAGCTCAGCTAGGTAGAGCGATGGCGTGGTGACCCATAGGTCCCGGGTTCAAA
TCCCGGCCGGCCCGCCA
Downstream region at tRNA end position 
gtttttctcg
Secondary structure (Cloverleaf model)
>A179000443	Thr	GGT
                   g      GCCA gtttttctcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    C   C
                  G       A
                  T       G *
                    G G T
intron: position=38, length=16 (in A-loop)
CACGTCGAGGCTTTTA
Intron
Comment/Decision
Genome/Seq. Info.-

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