The detailed information of tRNA gene sequence


Sequence ID>A179000495
Genome IDCP007536
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrososphaera viennensis EN76 [CP007536]
Start position on genome 2318357
End posion on genome 2318452
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttgatttcgc
tRNA gene sequence 
GGGTTCGTAGCTCAGCCAGGTAGAGCGTTTGGCTCTTAGTTAAAATGTCGTGGGTCCGAA
TCCCACCGAACCCGctt
Downstream region at tRNA end position 
tatccttggc
Secondary structure (Cloverleaf model)
>A179000495	Lys	CTT
                   c      Gctt tatccttggc
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    A       | | | |                 T C
    G       G A G C
      G T A        G     ATGTC
                    T - A
                    T - A
                    T - A
                    G + T
                    G + T
                  C       G
                  T       A *
                    C T T
intron: position=38, length=22 (in A-loop)
ACCAATCAGTGTATTTCACTGG
Intron
Comment/Decision
Genome/Seq. Info.-

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