The detailed information of tRNA gene sequence


Sequence ID>A179000496
Genome IDCP007536
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrososphaera viennensis EN76 [CP007536]
Start position on genome 2458210
End posion on genome 2458320
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aggtgcgcgc
tRNA gene sequence 
GCGGGGGTCGCCAAGCCCGGTCAACGGCGCAGGGCTTAGAACCCTGTTCCTTAGGGATTC
GTGGGTTCAAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
cttctctttt
Secondary structure (Cloverleaf model)
>A179000496	Leu	TAG
                   c      ACCA cttctctttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        C      | | | | |     A
  C         A C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TTCCTTAGGGATTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    T A G
intron: position=38, length=23 (in A-loop)
ATGGGTATGCATTAGCCCCTACA
Intron
Comment/Decision
Genome/Seq. Info.-

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