The detailed information of tRNA gene sequence


Sequence ID>A179000531
Genome IDCP009552
Search identical group
Phylum/ClassEuryarchaeota
SpeciesGeoglobus acetivorans SBH6 [CP009552]
Start position on genome 1607948
End posion on genome 1607846
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gctattgaat
tRNA gene sequence 
CCCGCCTTAGCTCAGAGGTAGAGCGCGGGACTGTAGATCCCGTGGTCCCCGGTTCAAATC
CGGGAGGCGGGACCA
Downstream region at tRNA end position 
tctacttctg
Secondary structure (Cloverleaf model)
>A179000531	Tyr	GTA
                   t      ACCA tctacttctg
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      A     C T C G       C C C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=28 (in A-loop)
TCTGCCCTGCCCCTGCAGGGGGGCAGTG
Intron
Comment/Decision
Genome/Seq. Info.-

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