The detailed information of tRNA gene sequence


Sequence ID>A179000534
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 952681
End posion on genome 952837
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttattttgt
tRNA gene sequence 
CCCCGGGTAGCGTAGCGGTATCGCGGCCGGCTGTAGGCCGGAGGGTCCCGGGTTCAAGTC
CCGGCCCGGGGACCA
Downstream region at tRNA end position 
ttctatatct
Secondary structure (Cloverleaf model)
>A179000534	Tyr	GTA
                   t      ACCA ttctatatct
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     T G C G       C C G G G     C
      G       | | |                 T T
      G     T C G C
        T A        G     GGGTC
                    G   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G *
                    G T A
intron: position=38, length=82 (in A-loop)
CTCGAAGCGCACGGCGAGAGGGGTAAATCCCTGCTGTGAAGCCGTGTCAGCCGGCTGGAAACCGGCAACG
CGTCTAAGACGC
Intron
Comment/Decision
Genome/Seq. Info.-

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