The detailed information of tRNA gene sequence


Sequence ID>A179000536
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1316748
End posion on genome 1316836
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tttagggtca
tRNA gene sequence 
GCCGGGGTAGCTCAGCTGGGAGAGCGCTCGGCTGAAGACCGAGAGGTCCCGGGTTCAAAT
CCCGGCCCCGGCACCA
Downstream region at tRNA end position 
ttctcggccc
Secondary structure (Cloverleaf model)
>A179000536	Phe	GAA
                   a      ACCA ttctcggccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G A A
intron: position=38, length=13 (in A-loop)
TCTCCCAGTAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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