The detailed information of tRNA gene sequence


Sequence ID>A179000543
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1418964
End posion on genome 1418853
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
actatctgag
tRNA gene sequence 
GGGGCCGTAGTCCAGCCTGGTAGGATGCCTGGCACGGCCCCAGGTGGTCCCGGGTTCAAA
TCCCGGCGGCCCCAtta
Downstream region at tRNA end position 
tcggcttgtt
Secondary structure (Cloverleaf model)
>A179000543	Pro	CGG
                   g      Atta tcggcttgtt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C C T G       C C G G G     C
    T       | | | +                 T T
    G       G G A T
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  A       C *
                    C G G
intron: position=38, length=38 (in A-loop)
TTTTAAGCCGCGGGACTCGGGATACAGTCCATCGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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