The detailed information of tRNA gene sequence


Sequence ID>A179000555
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 1123349
End posion on genome 1123250
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cggaacagat
tRNA gene sequence 
GCGAGGGTAGCCGAGTTGGCCAAAGGCGCAGGACTTAAGATTCTGTCCCGCAGGGGTTCA
GGGGTTCGAATCCCCTCCCTCGCActa
Downstream region at tRNA end position 
cacccacaaa
Secondary structure (Cloverleaf model)
>A179000555	Leu	TAA
                   t      Acta cacccacaaa
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
    T T G A        A      | | | | |     G
  G         G C C G       A G G G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCCCGCAGGGGTTC
                    C - G
                    A - T
                    G - C
                    G + T
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=16 (in A-loop)
ACTCCAAAGGGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK