The detailed information of tRNA gene sequence


Sequence ID>A179000588
Genome IDCP011070
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus adriaticus NF5 [CP011070]
Start position on genome 1350339
End posion on genome 1350239
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
caaactcatt
tRNA gene sequence 
GCAGAGGTATCGAAGCCCGGTCAACCGAGAGGGACTCAAGATCCCTTCTCTCAGGAGTTC
GTGGGTTCAAATCCCACCCTCTGCAttt
Downstream region at tRNA end position 
tattatgatt
Secondary structure (Cloverleaf model)
>A179000588	Leu	CAA
                   t      Attt tattatgatt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  C         A G C T       G T G G G     C
  G           | | |                 T T
  G         C C G A
    T C A A        G     TCTCTCAGGAGTTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=16 (in A-loop)
ATCTTCATAATAGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK