The detailed information of tRNA gene sequence


Sequence ID>A179000616
Genome IDCP012173
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula ARS50-2 [CP012173]
Start position on genome 1806901
End posion on genome 1806814
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctagatgtag
tRNA gene sequence 
GGACCCGTAGCTCAGCCAGGATAGAGCGCCGGCCTTCTAAGCCGAGGGTCGGGGGTCCGA
ATCCCCCCGGGTCCGcat
Downstream region at tRNA end position 
tcaaatttta
Secondary structure (Cloverleaf model)
>A179000616	Arg	TCT
                   g      Gcat tcaaatttta
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     G
  A         C T C G       G G G G G     C
  G         | | | |                 T C
  G         G A G C
    A T A          G     GGGTC
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=13 (in A-loop)
ACAGGCCGAAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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