The detailed information of tRNA gene sequence


Sequence ID>A179000648
Genome IDCP013011
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrodictium delaneyi Su06 [CP013011]
Start position on genome 458565
End posion on genome 458448
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtctcgggga
tRNA gene sequence 
GGGGCCGTCGTCTAGCTTGGCAGGATGCGGGGCTTGGGCCCCCGTGGTCCCGGGTTCAAA
TCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
ctttctagaa
Secondary structure (Cloverleaf model)
>A179000648	Pro	TGG
                   a      ACCA ctttctagaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        C      | | | | |     A
    T       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G C A        G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G *
                    T G G
intron: position=38, length=41 (in A-loop)
ACCGCTCCTGGGAGAAGGCGTGGGTTCCCGAGCGGCAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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