The detailed information of tRNA gene sequence


Sequence ID>A179000666
Genome IDCP017006
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20 [CP017006]
Start position on genome 419876
End posion on genome 419787
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aatacgtgta
tRNA gene sequence 
CCCGCCGTAGCTCAGCCCGGTTTAGAGCGCCCGGCTGTAGACCGGGTGGTCCGGGGTTCA
AGTCCCCGCGGCGGGActt
Downstream region at tRNA end position 
cttttccaat
Secondary structure (Cloverleaf model)
>A179000666	Tyr	GTA
                   a      Actt cttttccaat
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T T A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=14 (in A-loop)
ATAGGGGGATAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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