The detailed information of tRNA gene sequence


Sequence ID>A179000675
Genome IDCP017922
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosocosmicus hydrocola G61 [CP017922]
Start position on genome 2008614
End posion on genome 2008712
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
attttgcaaa
tRNA gene sequence 
GGAGGAGTCGCGTAGCCTGGTCAAACGCGCAGGACTCAAGATCCCGTCCTTTAGGGGTTC
GTGGGTTCGAATCCCACCTCCTCCAtcc
Downstream region at tRNA end position 
aagttttagg
Secondary structure (Cloverleaf model)
>A179000675	Leu	CAA
                   a      Atcc aagttttagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    C C G A        C      | | | | |     G
  T         T G C G       G T G G G     C
  G         | | | |                 T T
  G         A C G C
    T C A A        G     TCCTTTAGGGGTTC
                    C - G
                    A   C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=14 (in A-loop)
ATTTGAGATAAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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