The detailed information of tRNA gene sequence


Sequence ID>A179000681
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2030031
End posion on genome 2029920
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gtttcgatga
tRNA gene sequence 
GGGCCGGTAGCTCAGTTAGGCAGAGCGTCTGGCTTTTAACCAGATGGTCGGGGGTTCAAC
TCCCTCCCGGCCCGcta
Downstream region at tRNA end position 
ttgctgtcgc
Secondary structure (Cloverleaf model)
>A179000681	Lys	TTT
                   a      Gcta ttgctgtcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     TGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=38 (in A-loop)
ACGAGTCCGCGCGTTCGATTCGGGCGGGTTCGGAAGTG
Intron
Comment/Decision
Genome/Seq. Info.-

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