The detailed information of tRNA gene sequence


Sequence ID>A179000689
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 2272031
End posion on genome 2271942
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agatattaat
tRNA gene sequence 
GCCGCGGTAGCTCAGCGTGGCTGGAGCGCTGCCCTGGTAAGGCAGAGGTCCCGGGTTCAA
ATCCCGGCCGCGGCTtat
Downstream region at tRNA end position 
tagatgaaat
Secondary structure (Cloverleaf model)
>A179000689	Thr	GGT
                   t      Ttat tagatgaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    G C G A        A      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A *
                    G G T
intron: position=38, length=15 (in A-loop)
TGCTACAGCCAAGGC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK