The detailed information of tRNA gene sequence


Sequence ID>A179000723
Genome IDLN890280
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotalea devanaterra [LN890280]
Start position on genome 460702
End posion on genome 460579
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gagaaacagt
tRNA gene sequence 
CCCACGCTAGCTCAGCCTGGTAGAGCTTCCGGCTGTAGACCGGGTTGTCGCAGGTTCAAA
TCCTGCGCGTGGGACCA
Downstream region at tRNA end position 
tatcataaac
Secondary structure (Cloverleaf model)
>A179000723	Tyr	GTA
                   t      ACCA tatcataaac
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C
                     C - G          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        T     TTGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=47 (in A-loop)
TGGTTGGCCATCGGCTAACCGTCATTCAGCCTATCAGGCTTACAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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