The detailed information of tRNA gene sequence


Sequence ID>A173000085
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 465306
End posion on genome 465380
Amino Acid Pseudo
Anticodon GTG
Upstream region at tRNA start position 
cgcaaccgtG
tRNA gene sequence 
TCCGGGTTGGGGTAATGGTTATCCTTCAGCCTTGTGGAGGCTGAGAAGCGGATTCGATTT
TCGCACCCGGACTCa
Downstream region at tRNA end position 
taacttttca
Secondary structure (Cloverleaf model)
>A173000085	Pseudo	GTG
                   G      CTCa taacttttca
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T T     A
      T A A        G      | | | + |     G
    G       T G G G       G C G G A     C
    G         | | +                 T T
    T       T C C T
      T A          T     AGAA
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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