The detailed information of tRNA gene sequence


Sequence ID>A173000157
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 530905
End posion on genome 530828
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tctcaacaca
tRNA gene sequence 
GGGTCTGTGGGGTAGCTTGGTCCATCCTTCGAGCTTTGGGAGTTCGAGACCCCGATTCGA
ATTCGGGCAGACCCACCA
Downstream region at tRNA end position 
ttttctaatt
Secondary structure (Cloverleaf model)
>A173000157	Pro	TGG
                   a      ACCA ttttctaatt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C T     A
    T C G A        G      | | | | |     G
  T         T G G G       C C C G A     C
  G           | | +                 T T
  G         T C C T
    T C C A        T     AGAC
                    C - G
                    G - C
                    A - T
                    G + T
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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