The detailed information of tRNA gene sequence


Sequence ID>A173000224
Genome IDCP009518
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcoides methylutens MM1 [CP009518]
Start position on genome 874286
End posion on genome 874356
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
gacatctatt
tRNA gene sequence 
GGCTGGACGGCAGAGTGGTTATGCGTCCGACTGCAGATCGGAGTATGTGAGTTTGATTCT
CACTCCGGCCTttg
Downstream region at tRNA end position 
gaatcaggtg
Secondary structure (Cloverleaf model)
>A173000224	Pseudo	GCA
                   t      Tttg gaatcaggtg
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C
                     G - C
                     A - T          T T
                    C     C A C T C     A
        G A        G      | | | | |     G
      T     G A C G       G T G A G     T
      G       | | |                 T T
      G     A T G C
        T T        G     GTAT
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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