The detailed information of tRNA gene sequence


Sequence ID>A172000021
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 682868
End posion on genome 682781
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tggtggtcga
tRNA gene sequence 
GCCGCCATAACTCAGATGGTAGAGTGTCTGGCTGTTAACCAGAATGTCACAGGTTCGAGC
CCTGTTGGCGGCGcat
Downstream region at tRNA end position 
tcctctgggc
Secondary structure (Cloverleaf model)
>A172000021	Asn	GTT
                   a      Gcat tcctctgggc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          C G
                    T     T G T C C     A
      A G A        A      | | | | |     G
    T       C T C A       A C A G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=15 (in A-loop)
ATTGAATAAGCAGCA
Intron
Comment/Decision
Genome/Seq. Info.-

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