The detailed information of tRNA gene sequence


Sequence ID>A172000038
Genome IDCP009517
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri 3 [CP009517]
Start position on genome 1163727
End posion on genome 1163798
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaattgctgt
tRNA gene sequence 
GTCAGGGTGGTGGAAAGGCTACGCAGTGGCCTGCAGATCCATTTTGTCCTGGTTCGATTC
CGGGCTCTGGCTtaa
Downstream region at tRNA end position 
aagttttctc
Secondary structure (Cloverleaf model)
>A172000038	Cys	GCA
                   t      Ttaa aagttttctc
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T T
                    T     G G G C C     A
        A A        G      | | + | |     G
      A     G G T G       C C T G G     C
      G       | + |                 T T
      G     A C G C
        C T        A     TTTGT
                    G + T
                    T - A
                    G - C
                    G - C
                    C   T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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