The detailed information of tRNA gene sequence


Sequence ID>A172000056
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 1565939
End posion on genome 1566031
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgtcataaag
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGTGGAGCGCCTCACTGGTAGTGAGGAGGTCCCGGGTTCGAA
TCCCGGCCGGGGCTCtg
Downstream region at tRNA end position 
gctttccctt
Secondary structure (Cloverleaf model)
>A172000056	Thr	GGT
                   g      TCtg gctttccctt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       G
                  T       A *
                    G G T
intron: position=38, length=18 (in A-loop)
ATGGTGGTTGACCGCCTA
Intron
Comment/Decision
Genome/Seq. Info.-

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