The detailed information of tRNA gene sequence


Sequence ID>A172000057
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 1728492
End posion on genome 1728399
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gatagcgctg
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGATAGAGCGGCGGCCTTCTAAGCCGTAGGTCGTGGGTTCGA
ATCCCACCGGGCCCGtag
Downstream region at tRNA end position 
cttattaagc
Secondary structure (Cloverleaf model)
>A172000057	Arg	TCT
                   g      Gtag cttattaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     G
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=19 (in A-loop)
CGGCGTTGCCGCCGGAGCG
Intron
Comment/Decision
Genome/Seq. Info.-

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