The detailed information of tRNA gene sequence


Sequence ID>A176000098
Genome IDCP003098
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum ferrireducens 1860 [CP003098]
Start position on genome 1015560
End posion on genome 1015659
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aaaagtgacg
tRNA gene sequence 
AGCCCGGTCGTCTAGCGGCCAAGGATGCGGGGCTTTGGACCCCGTGGCCCGGGTTCGAAT
CCCGGCCGGGCTAcca
Downstream region at tRNA end position 
tccacatctt
Secondary structure (Cloverleaf model)
>A176000098	Gln	TTG
                   g      Acca tccacatctt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     TGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T T G
intron: position=52, length=27
TCGAGCCCCTTATGGGGCTCGGGCTAG
Intron
Comment/Decision
Genome/Seq. Info.-

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