The detailed information of tRNA gene sequence


Sequence ID>A177000070
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1551837
End posion on genome 1551753
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
acaacaaatc
tRNA gene sequence 
CCCGCCGTAGCTCAGCGGTTAGAGCGCCCGGCTGTAGACCGGGTGGTCCAGGGTTCAAGT
CCCTGCGGCGGGAtac
Downstream region at tRNA end position 
aattatgtta
Secondary structure (Cloverleaf model)
>A177000070	Tyr	GTA
                   c      Atac aattatgtta
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G T C C C     A
      C G A        A      | | | | |     A
    G       C T C G       C A G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=12 (in A-loop)
ATAGGGGCTGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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